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authorThomas Wuerthinger <thomas.wuerthinger@oracle.com>2024-01-29 22:19:23 +0100
committerGitHub <noreply@github.com>2024-01-29 22:19:23 +0100
commit036f9a01b18ef2d35dac6bbceec46b1ccbfe4f2b (patch)
tree5aeafdaf02999ed0a917b260bcd788fd5b5b5042 /src/main/java/dev/morling
parent5b9703283a31df9815b2f379fb483f14368ffbe5 (diff)
Clean up, fine tuning, credit section for thomaswue (#646)
* Some clean up, fine tuning, removing non-supported options, added credit section and additional comments. * Put license header year back to 2023 to pass checks. * Remove static linking (as it requires some more setup on the target machine).
Diffstat (limited to 'src/main/java/dev/morling')
-rw-r--r--src/main/java/dev/morling/onebrc/CalculateAverage_thomaswue.java269
1 files changed, 126 insertions, 143 deletions
diff --git a/src/main/java/dev/morling/onebrc/CalculateAverage_thomaswue.java b/src/main/java/dev/morling/onebrc/CalculateAverage_thomaswue.java
index c02a881..9b21f91 100644
--- a/src/main/java/dev/morling/onebrc/CalculateAverage_thomaswue.java
+++ b/src/main/java/dev/morling/onebrc/CalculateAverage_thomaswue.java
@@ -16,122 +16,68 @@
package dev.morling.onebrc;
import java.io.IOException;
-import java.nio.ByteBuffer;
-import java.nio.ByteOrder;
import java.nio.channels.FileChannel;
-import java.nio.charset.StandardCharsets;
-import java.nio.file.Path;
-import java.nio.file.StandardOpenOption;
import java.util.*;
import java.util.concurrent.atomic.AtomicLong;
-import java.util.stream.IntStream;
/**
- * Simple solution that memory maps the input file, then splits it into one segment per available core and uses
- * sun.misc.Unsafe to directly access the mapped memory. Uses a long at a time when checking for collision.
- * <p>
- * Runs in 0.41s on my Intel i9-13900K
- * Perf stats:
- * 25,286,227,376 cpu_core/cycles/
- * 26,833,723,225 cpu_atom/cycles/
+ * The solution starts a child worker process for the actual work such that clean up of the memory mapping can occur
+ * while the main process already returns with the result. The worker then memory maps the input file, creates a worker
+ * thread per available core, and then processes segments of size {@link #SEGMENT_SIZE} at a time. The segments are
+ * split into 3 parts and cursors for each of those parts are processing the segment simultaneously in the same thread.
+ * Results are accumulated into {@link Result} objects and a tree map is used to sequentially accumulate the results in
+ * the end.
+ *
+ * Runs in 0.40s on an Intel i9-13900K.
+ *
+ * Credit:
+ * Quan Anh Mai for branchless number parsing code
+ * Alfonso² Peterssen for suggesting memory mapping with unsafe and the subprocess idea
+ * Artsiom Korzun for showing the benefits of work stealing at 2MB segments instead of equal split between workers
*/
public class CalculateAverage_thomaswue {
private static final String FILE = "./measurements.txt";
private static final int MIN_TEMP = -999;
private static final int MAX_TEMP = 999;
-
- // Holding the current result for a single city.
- private static class Result {
- long lastNameLong, secondLastNameLong;
- long min, max;
- long sum;
- int count;
- long[] name;
- String nameAsString;
-
- private Result() {
- this.min = MAX_TEMP;
- this.max = MIN_TEMP;
- }
-
- public String toString() {
- return round(((double) min) / 10.0) + "/" + round((((double) sum) / 10.0) / count) + "/" + round(((double) max) / 10.0);
- }
-
- private static double round(double value) {
- return Math.round(value * 10.0) / 10.0;
- }
-
- // Accumulate another result into this one.
- private void add(Result other) {
- if (other.min < min) {
- min = other.min;
- }
- if (other.max > max) {
- max = other.max;
- }
- sum += other.sum;
- count += other.count;
- }
-
- public String calcName() {
- if (nameAsString == null) {
- ByteBuffer bb = ByteBuffer.allocate(name.length * Long.BYTES).order(ByteOrder.nativeOrder());
- bb.asLongBuffer().put(name);
- byte[] array = bb.array();
- int i = 0;
- while (array[i++] != ';')
- ;
- nameAsString = new String(array, 0, i - 1, StandardCharsets.UTF_8);
- }
- return nameAsString;
- }
- }
+ private static final int MAX_NAME_LENGTH = 100;
+ private static final int MAX_CITIES = 10000;
+ private static final int SEGMENT_SIZE = 1 << 21;
+ private static final int HASH_TABLE_SIZE = 1 << 17;
public static void main(String[] args) throws IOException, InterruptedException {
+ // Start worker subprocess if this process is not the worker.
if (args.length == 0 || !("--worker".equals(args[0]))) {
spawnWorker();
return;
}
- // Calculate input segments.
- int numberOfWorkers = Runtime.getRuntime().availableProcessors();
- final AtomicLong cursor = new AtomicLong();
- final long fileEnd;
- final long fileStart;
- try (var fileChannel = FileChannel.open(Path.of(FILE), StandardOpenOption.READ)) {
+ int numberOfWorkers = Runtime.getRuntime().availableProcessors();
+ try (var fileChannel = FileChannel.open(java.nio.file.Path.of(FILE), java.nio.file.StandardOpenOption.READ)) {
long fileSize = fileChannel.size();
- fileStart = fileChannel.map(FileChannel.MapMode.READ_ONLY, 0, fileSize, java.lang.foreign.Arena.global()).address();
- cursor.set(fileStart);
- fileEnd = fileStart + fileSize;
- }
-
- // Parallel processing of segments.
- Thread[] threads = new Thread[numberOfWorkers];
- List<Result>[] allResults = new List[numberOfWorkers];
- for (int i = 0; i < threads.length; ++i) {
- final int index = i;
- threads[i] = new Thread(() -> {
- Result[] resultArray = parseLoop(cursor, fileEnd, fileStart);
- List<Result> results = new ArrayList<>(500);
- for (Result r : resultArray) {
- if (r != null) {
- r.calcName();
- results.add(r);
- }
- }
- allResults[index] = results;
- });
- threads[i].start();
- }
+ final long fileStart = fileChannel.map(FileChannel.MapMode.READ_ONLY, 0, fileSize, java.lang.foreign.Arena.global()).address();
+ final long fileEnd = fileStart + fileSize;
+ final AtomicLong cursor = new AtomicLong(fileStart);
+
+ // Parallel processing of segments.
+ Thread[] threads = new Thread[numberOfWorkers];
+ List<Result>[] allResults = new List[numberOfWorkers];
+ for (int i = 0; i < threads.length; ++i) {
+ final int index = i;
+ threads[i] = new Thread(() -> {
+ List<Result> results = new ArrayList<>(MAX_CITIES);
+ parseLoop(cursor, fileEnd, fileStart, results);
+ allResults[index] = results;
+ });
+ threads[i].start();
+ }
+ for (Thread thread : threads) {
+ thread.join();
+ }
- for (Thread thread : threads) {
- thread.join();
+ // Final output.
+ System.out.println(accumulateResults(allResults));
+ System.out.close();
}
-
- // Final output.
- System.out.println(accumulateResults(allResults));
- System.out.close();
}
private static void spawnWorker() throws IOException {
@@ -144,31 +90,30 @@ public class CalculateAverage_thomaswue {
.start().getInputStream().transferTo(System.out);
}
- // Accumulate results sequentially for simplicity.
private static TreeMap<String, Result> accumulateResults(List<Result>[] allResults) {
TreeMap<String, Result> result = new TreeMap<>();
for (List<Result> resultArr : allResults) {
for (Result r : resultArr) {
- String name = r.calcName();
- Result current = result.putIfAbsent(name, r);
+ Result current = result.putIfAbsent(r.calcName(), r);
if (current != null) {
- current.add(r);
+ current.accumulate(r);
}
}
}
return result;
}
- private static Result findResult(long initialWord, long initialPos, Scanner scanner, Result[] results) {
-
+ private static Result findResult(long initialWord, long initialPos, Scanner scanner, Result[] results, List<Result> collectedResults) {
Result existingResult;
long word = initialWord;
long pos = initialPos;
long hash;
long nameAddress = scanner.pos();
- // Search for ';', one long at a time.
+ // Search for ';', one long at a time. There are two common cases that a specially treated:
+ // (b) the ';' is found in the first 16 bytes
if (pos != 0) {
+ // Special case for when the ';' is found in the first 8 bytes.
pos = Long.numberOfTrailingZeros(pos) >>> 3;
scanner.add(pos);
word = mask(word, pos);
@@ -180,11 +125,10 @@ public class CalculateAverage_thomaswue {
if (existingResult != null && existingResult.lastNameLong == word) {
return existingResult;
}
- else {
- scanner.setPos(nameAddress + pos);
- }
+ scanner.setPos(nameAddress + pos);
}
else {
+ // Special case for when the ';' is found in bytes 9-16.
scanner.add(8);
hash = word;
long prevWord = word;
@@ -201,11 +145,10 @@ public class CalculateAverage_thomaswue {
if (existingResult != null && existingResult.lastNameLong == word && existingResult.secondLastNameLong == prevWord) {
return existingResult;
}
- else {
- scanner.setPos(nameAddress + pos + 8);
- }
+ scanner.setPos(nameAddress + pos + 8);
}
else {
+ // Slow-path for when the ';' could not be found in the first 16 bytes.
scanner.add(8);
hash ^= word;
while (true) {
@@ -234,20 +177,20 @@ public class CalculateAverage_thomaswue {
outer: while (true) {
existingResult = results[tableIndex];
if (existingResult == null) {
- existingResult = newEntry(results, nameAddress, tableIndex, nameLength, scanner);
+ existingResult = newEntry(results, nameAddress, tableIndex, nameLength, scanner, collectedResults);
}
// Check for collision.
int i = 0;
- long[] name = existingResult.name;
for (; i < nameLength + 1 - 8; i += 8) {
- if (scanner.getLongAt(i, name) != scanner.getLongAt(nameAddress + i)) {
+ if (scanner.getLongAt(existingResult.nameAddress + i) != scanner.getLongAt(nameAddress + i)) {
+ // Collision error, try next.
tableIndex = (tableIndex + 31) & (results.length - 1);
continue outer;
}
}
int remainingShift = (64 - (nameLength + 1 - i) << 3);
- if (((existingResult.lastNameLong ^ (scanner.getLongAt(nameAddress + i) << remainingShift)) == 0)) {
+ if (existingResult.lastNameLong == (scanner.getLongAt(nameAddress + i) << remainingShift)) {
break;
}
else {
@@ -258,7 +201,7 @@ public class CalculateAverage_thomaswue {
return existingResult;
}
- private static long nextNL(long prev) {
+ private static long nextNewLine(long prev) {
while (true) {
long currentWord = Scanner.UNSAFE.getLong(prev);
long pos = findNewLine(currentWord);
@@ -273,11 +216,9 @@ public class CalculateAverage_thomaswue {
return prev;
}
- private static final int SEGMENT_SIZE = 1024 * 1024 * 2;
-
// Main parse loop.
- private static Result[] parseLoop(AtomicLong counter, long fileEnd, long fileStart) {
- Result[] results = new Result[1 << 17];
+ private static Result[] parseLoop(AtomicLong counter, long fileEnd, long fileStart, List<Result> collectedResults) {
+ Result[] results = new Result[HASH_TABLE_SIZE];
while (true) {
long current = counter.addAndGet(SEGMENT_SIZE) - SEGMENT_SIZE;
@@ -286,18 +227,18 @@ public class CalculateAverage_thomaswue {
return results;
}
- long segmentEnd = nextNL(Math.min(fileEnd - 1, current + SEGMENT_SIZE));
+ long segmentEnd = nextNewLine(Math.min(fileEnd - 1, current + SEGMENT_SIZE));
long segmentStart;
if (current == fileStart) {
segmentStart = current;
}
else {
- segmentStart = nextNL(current) + 1;
+ segmentStart = nextNewLine(current) + 1;
}
long dist = (segmentEnd - segmentStart) / 3;
- long midPoint1 = nextNL(segmentStart + dist);
- long midPoint2 = nextNL(segmentStart + dist + dist);
+ long midPoint1 = nextNewLine(segmentStart + dist);
+ long midPoint2 = nextNewLine(segmentStart + dist + dist);
Scanner scanner1 = new Scanner(segmentStart, midPoint1);
Scanner scanner2 = new Scanner(midPoint1 + 1, midPoint2);
@@ -319,9 +260,9 @@ public class CalculateAverage_thomaswue {
long pos1 = findDelimiter(word1);
long pos2 = findDelimiter(word2);
long pos3 = findDelimiter(word3);
- Result existingResult1 = findResult(word1, pos1, scanner1, results);
- Result existingResult2 = findResult(word2, pos2, scanner2, results);
- Result existingResult3 = findResult(word3, pos3, scanner3, results);
+ Result existingResult1 = findResult(word1, pos1, scanner1, results, collectedResults);
+ Result existingResult2 = findResult(word2, pos2, scanner2, results, collectedResults);
+ Result existingResult3 = findResult(word3, pos3, scanner3, results, collectedResults);
long number1 = scanNumber(scanner1);
long number2 = scanNumber(scanner2);
long number3 = scanNumber(scanner3);
@@ -333,19 +274,19 @@ public class CalculateAverage_thomaswue {
while (scanner1.hasNext()) {
long word = scanner1.getLong();
long pos = findDelimiter(word);
- record(findResult(word, pos, scanner1, results), scanNumber(scanner1));
+ record(findResult(word, pos, scanner1, results, collectedResults), scanNumber(scanner1));
}
while (scanner2.hasNext()) {
long word = scanner2.getLong();
long pos = findDelimiter(word);
- record(findResult(word, pos, scanner2, results), scanNumber(scanner2));
+ record(findResult(word, pos, scanner2, results, collectedResults), scanNumber(scanner2));
}
while (scanner3.hasNext()) {
long word = scanner3.getLong();
long pos = findDelimiter(word);
- record(findResult(word, pos, scanner3, results), scanNumber(scanner3));
+ record(findResult(word, pos, scanner3, results, collectedResults), scanNumber(scanner3));
}
}
}
@@ -361,10 +302,10 @@ public class CalculateAverage_thomaswue {
private static void record(Result existingResult, long number) {
if (number < existingResult.min) {
- existingResult.min = number;
+ existingResult.min = (short) number;
}
if (number > existingResult.max) {
- existingResult.max = number;
+ existingResult.max = (short) number;
}
existingResult.sum += number;
existingResult.count++;
@@ -406,31 +347,71 @@ public class CalculateAverage_thomaswue {
return tmp;
}
- private static Result newEntry(Result[] results, long nameAddress, int hash, int nameLength, Scanner scanner) {
+ private static Result newEntry(Result[] results, long nameAddress, int hash, int nameLength, Scanner scanner, List<Result> collectedResults) {
Result r = new Result();
results[hash] = r;
- long[] name = new long[(nameLength / Long.BYTES) + 1];
- int pos = 0;
int i = 0;
for (; i < nameLength + 1 - Long.BYTES; i += Long.BYTES) {
- name[pos++] = scanner.getLongAt(nameAddress + i);
}
-
- if (pos > 0) {
- r.secondLastNameLong = name[pos - 1];
+ if (nameLength + 1 > 8) {
+ r.secondLastNameLong = scanner.getLongAt(nameAddress + i - 8);
}
-
int remainingShift = (64 - (nameLength + 1 - i) << 3);
long lastWord = (scanner.getLongAt(nameAddress + i) << remainingShift);
r.lastNameLong = lastWord;
- name[pos] = lastWord >> remainingShift;
- r.name = name;
+ r.nameAddress = nameAddress;
+ collectedResults.add(r);
return r;
}
- private static class Scanner {
+ private static class Result {
+ long lastNameLong, secondLastNameLong;
+ short min, max;
+ int count;
+ long sum;
+ long nameAddress;
+ private Result() {
+ this.min = MAX_TEMP;
+ this.max = MIN_TEMP;
+ }
+
+ public String toString() {
+ return round(((double) min) / 10.0) + "/" + round((((double) sum) / 10.0) / count) + "/" + round(((double) max) / 10.0);
+ }
+
+ private static double round(double value) {
+ return Math.round(value * 10.0) / 10.0;
+ }
+
+ private void accumulate(Result other) {
+ if (other.min < min) {
+ min = other.min;
+ }
+ if (other.max > max) {
+ max = other.max;
+ }
+ sum += other.sum;
+ count += other.count;
+ }
+
+ public String calcName() {
+ Scanner scanner = new Scanner(nameAddress, nameAddress + MAX_NAME_LENGTH + 1);
+ int nameLength = 0;
+ while (scanner.getByteAt(nameAddress + nameLength) != ';') {
+ nameLength++;
+ }
+ byte[] array = new byte[nameLength];
+ for (int i = 0; i < nameLength; ++i) {
+ array[i] = scanner.getByteAt(nameAddress + i);
+ }
+ return new String(array, java.nio.charset.StandardCharsets.UTF_8);
+ }
+ }
+
+ private static class Scanner {
private static final sun.misc.Unsafe UNSAFE = initUnsafe();
+ private long pos, end;
private static sun.misc.Unsafe initUnsafe() {
try {
@@ -443,8 +424,6 @@ public class CalculateAverage_thomaswue {
}
}
- long pos, end;
-
public Scanner(long start, long end) {
this.pos = start;
this.end = end;
@@ -470,6 +449,10 @@ public class CalculateAverage_thomaswue {
return UNSAFE.getLong(pos);
}
+ byte getByteAt(long pos) {
+ return UNSAFE.getByte(pos);
+ }
+
long getLongAt(long pos, long[] array) {
return UNSAFE.getLong(array, pos + sun.misc.Unsafe.ARRAY_LONG_BASE_OFFSET);
}