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-rw-r--r--src/main/java/dev/morling/onebrc/CalculateAverage_parkertimmins.java330
1 files changed, 330 insertions, 0 deletions
diff --git a/src/main/java/dev/morling/onebrc/CalculateAverage_parkertimmins.java b/src/main/java/dev/morling/onebrc/CalculateAverage_parkertimmins.java
new file mode 100644
index 0000000..71412fb
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+++ b/src/main/java/dev/morling/onebrc/CalculateAverage_parkertimmins.java
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+/*
+ * Copyright 2023 The original authors
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package dev.morling.onebrc;
+
+import jdk.incubator.vector.ByteVector;
+import jdk.incubator.vector.VectorMask;
+import jdk.incubator.vector.VectorOperators;
+
+import java.lang.foreign.Arena;
+import java.lang.foreign.MemorySegment;
+
+import java.lang.foreign.ValueLayout;
+import java.lang.reflect.Array;
+import java.nio.ByteBuffer;
+import java.nio.ByteOrder;
+import java.nio.charset.StandardCharsets;
+import java.io.IOException;
+import java.io.RandomAccessFile;
+import java.nio.MappedByteBuffer;
+import java.nio.channels.FileChannel;
+import java.util.*;
+import java.util.concurrent.atomic.AtomicLong;
+import java.util.zip.CRC32C;
+
+public class CalculateAverage_parkertimmins {
+ private static final String FILE = "./measurements.txt";
+ // private static final String FILE = "./full_measurements.no_license";
+
+ private static record ResultRow(double min, double mean, double max) {
+ public String toString() {
+ return round(min) + "/" + round(mean) + "/" + round(max);
+ }
+
+ private double round(double value) {
+ return Math.round(value * 10.0) / 10.0;
+ }
+ };
+
+ static class OpenHashTable {
+ static class Entry {
+ byte[] key;
+ short min;
+ short max;
+ long sum = 0;
+ long count = 0;
+ int hash;
+
+ void merge(OpenHashTable.Entry other) {
+ min = (short) Math.min(min, other.min);
+ max = (short) Math.max(max, other.max);
+ sum += other.sum;
+ count += other.count;
+ }
+ }
+
+ static final int bits = 14;
+ static final int tableSize = 1 << bits; // 16k
+ static final int mask = tableSize - 1;
+ final Entry[] entries = new Entry[tableSize];
+
+ void add(byte[] buf, int sLen, short val, int hash) {
+ int idx = hash & mask;
+
+ while (true) {
+ Entry entry = entries[idx];
+
+ // key not present, so add it
+ if (entry == null) {
+ entry = entries[idx] = new Entry();
+ entry.key = Arrays.copyOf(buf, sLen);
+ entry.min = entry.max = val;
+ entry.sum += val;
+ entry.count++;
+ entry.hash = hash;
+ break;
+ }
+ else {
+ if (entry.hash == hash && entry.key.length == sLen && Arrays.equals(entry.key, 0, sLen, buf, 0, sLen)) {
+ entry.min = (short) Math.min(entry.min, val);
+ entry.max = (short) Math.max(entry.max, val);
+ entry.sum += val;
+ entry.count++;
+ break;
+ }
+ else {
+ idx = (idx + 1) & mask;
+ }
+ }
+ }
+ }
+ }
+
+ static long findNextEntryStart(MemorySegment ms, long offset) {
+ long curr = offset;
+ while (ms.get(ValueLayout.JAVA_BYTE, curr) != '\n') {
+ curr++;
+ }
+ curr++;
+ return curr;
+ }
+
+ static short[] digits10s = { 0, 100, 200, 300, 400, 500, 600, 700, 800, 900 };
+ static short[] digits1s = { 0, 10, 20, 30, 40, 50, 60, 70, 80, 90 };
+
+ static void processRangeScalar(MemorySegment ms, long start, long end, final OpenHashTable localAgg) {
+ byte[] buf = new byte[128];
+
+ long curr = start;
+ long limit = end;
+
+ while (curr < limit) {
+ int i = 0;
+ byte val = ms.get(ValueLayout.JAVA_BYTE, curr);
+ while (val != ';') {
+ buf[i++] = val;
+ curr++;
+ val = ms.get(ValueLayout.JAVA_BYTE, curr);
+ }
+
+ int sLen = i;
+ int hash = hash(buf, sLen);
+
+ curr++; // skip semicolon
+
+ long tempIdx = curr;
+ boolean neg = ms.get(ValueLayout.JAVA_BYTE, tempIdx) == '-';
+ boolean twoDig = ms.get(ValueLayout.JAVA_BYTE, tempIdx + 1 + (neg ? 1 : 0)) == '.';
+ int len = 3 + (neg ? 1 : 0) + (twoDig ? 0 : 1);
+ int d0 = ((char) ms.get(ValueLayout.JAVA_BYTE, tempIdx + len - 1)) - '0';
+ int d1 = ((char) ms.get(ValueLayout.JAVA_BYTE, tempIdx + len - 3)) - '0';
+ int base = d0 + digits1s[d1] + (twoDig ? 0 : digits10s[((char) ms.get(ValueLayout.JAVA_BYTE, tempIdx + len - 4)) - '0']);
+ short temp = (short) (neg ? -base : base);
+
+ localAgg.add(buf, sLen, temp, hash);
+ curr = tempIdx + len + 1;
+ }
+ }
+
+ static int hash(byte[] buf, int sLen) {
+ // TODO find a hash that works directly from byte array
+ // if shorter than 8 chars, mask out upper bits
+ long mask = sLen < 8 ? -(1L << ((8 - sLen) << 3)) : 0xFFFFFFFFL;
+ long val = ((buf[0] & 0xffL) << 56) | ((buf[1] & 0xffL) << 48) | ((buf[2] & 0xffL) << 40) | ((buf[3] & 0xffL) << 32) | ((buf[4] & 0xffL) << 24)
+ | ((buf[5] & 0xffL) << 16) | ((buf[6] & 0xFFL) << 8) | (buf[7] & 0xffL);
+ val &= mask;
+
+ // also worth trying: https://lemire.me/blog/2015/10/22/faster-hashing-without-effort/
+ // lemire: https://lemire.me/blog/2023/07/14/recognizing-string-prefixes-with-simd-instructions/
+ int hash = (int) (((((val >> 32) ^ val) & 0xffffffffL) * 3523216699L) >> 32);
+ return hash;
+ }
+
+ static void processRangeSIMD(MemorySegment ms, boolean frontPad, boolean backPad, long start, long end, final OpenHashTable localAgg) {
+ byte[] buf = new byte[128];
+
+ long curr = frontPad ? findNextEntryStart(ms, start) : start;
+ long limit = end - padding;
+
+ var needle = ByteVector.broadcast(ByteVector.SPECIES_256, ';');
+ while (curr < limit) {
+
+ int segStart = 0;
+ int sLen;
+
+ while (true) {
+ var section = ByteVector.fromMemorySegment(ByteVector.SPECIES_256, ms, curr + segStart, ByteOrder.LITTLE_ENDIAN);
+ section.intoArray(buf, segStart);
+ VectorMask<Byte> matches = section.compare(VectorOperators.EQ, needle);
+ int idx = matches.firstTrue();
+ if (idx != 32) {
+ sLen = segStart + idx;
+ break;
+ }
+ segStart += 32;
+ }
+
+ int hash = hash(buf, sLen);
+
+ curr += sLen;
+ curr++; // semicolon
+
+ long tempIdx = curr;
+ boolean neg = ms.get(ValueLayout.JAVA_BYTE, tempIdx) == '-';
+ boolean twoDig = ms.get(ValueLayout.JAVA_BYTE, tempIdx + 1 + (neg ? 1 : 0)) == '.';
+ int len = 3 + (neg ? 1 : 0) + (twoDig ? 0 : 1);
+ int d0 = ((char) ms.get(ValueLayout.JAVA_BYTE, tempIdx + len - 1)) - '0';
+ int d1 = ((char) ms.get(ValueLayout.JAVA_BYTE, tempIdx + len - 3)) - '0';
+ int base = d0 + digits1s[d1] + (twoDig ? 0 : digits10s[((char) ms.get(ValueLayout.JAVA_BYTE, tempIdx + len - 4)) - '0']);
+ short temp = (short) (neg ? -base : base);
+
+ localAgg.add(buf, sLen, temp, hash);
+ curr = tempIdx + len + 1;
+ }
+
+ // last batch is near end of file, process without SIMD to avoid out-of-bounds
+ if (!backPad) {
+ processRangeScalar(ms, curr, end, localAgg);
+ }
+ }
+
+ /**
+ * For debugging issues with hash function
+ */
+ static void checkHashDistributionQuality(ArrayList<OpenHashTable> localAggs) {
+ HashSet<Integer> uniquesHashValues = new HashSet<Integer>();
+ HashSet<String> uniqueCities = new HashSet<String>();
+ HashMap<String, HashSet<Integer>> cityToHash = new HashMap<>();
+
+ for (var agg : localAggs) {
+ for (OpenHashTable.Entry entry : agg.entries) {
+ if (entry == null) {
+ continue;
+ }
+ uniquesHashValues.add(entry.hash);
+ String station = new String(entry.key, StandardCharsets.UTF_8); // for UTF-8 encoding
+ uniqueCities.add(station);
+
+ if (!cityToHash.containsKey(station)) {
+ cityToHash.put(station, new HashSet<>());
+ }
+ cityToHash.get(station).add(entry.hash);
+ }
+ }
+
+ for (var pair : cityToHash.entrySet()) {
+ if (pair.getValue().size() > 1) {
+ System.err.println("multiple hashes: " + pair.getKey() + " " + pair.getValue());
+ }
+ }
+
+ System.err.println("Unique stations: " + uniqueCities.size() + ", unique hash values: " + uniquesHashValues.size());
+ }
+
+ /**
+ * Combine thread local values
+ */
+ static HashMap<String, OpenHashTable.Entry> mergeAggregations(ArrayList<OpenHashTable> localAggs) {
+ HashMap<String, OpenHashTable.Entry> global = new HashMap<>();
+ for (var agg : localAggs) {
+ for (OpenHashTable.Entry entry : agg.entries) {
+ if (entry == null) {
+ continue;
+ }
+ String station = new String(entry.key, StandardCharsets.UTF_8); // for UTF-8 encoding
+ var currentVal = global.get(station);
+ if (currentVal != null) {
+ currentVal.merge(entry);
+ }
+ else {
+ global.put(station, entry);
+ }
+ }
+ }
+ return global;
+ }
+
+ static final long batchSize = 10_000_000;
+
+ static final int padding = 200; // max entry size is 107ish == 100 (station) + 1 (semicolon) + 5 (temp, eg -99.9) + 1 (newline)
+
+ public static void main(String[] args) throws IOException, InterruptedException {
+ RandomAccessFile file = new RandomAccessFile(FILE, "r");
+ FileChannel channel = file.getChannel();
+
+ int numThreads = Runtime.getRuntime().availableProcessors();
+
+ final long fileSize = channel.size();
+ final MemorySegment ms = channel.map(FileChannel.MapMode.READ_ONLY, 0, fileSize, Arena.global());
+ final ArrayList<OpenHashTable> localAggs = new ArrayList<>(numThreads);
+ Thread[] threads = new Thread[numThreads];
+ final AtomicLong progress = new AtomicLong(0);
+
+ class Task implements Runnable {
+ final int threadId;
+
+ Task(int threadId) {
+ this.threadId = threadId;
+ }
+
+ @Override
+ public void run() {
+ var localAgg = localAggs.get(threadId);
+ while (true) {
+ final long startBatch = progress.getAndAdd(batchSize);
+ if (startBatch >= fileSize) {
+ break;
+ }
+ final long endBatch = Math.min(startBatch + batchSize, fileSize);
+ final boolean first = startBatch == 0;
+ final boolean frontPad = !first;
+ final boolean last = endBatch == fileSize;
+ final boolean backPad = !last;
+ processRangeSIMD(ms, frontPad, backPad, startBatch, endBatch, localAgg);
+ }
+ }
+ }
+
+ for (int t = 0; t < numThreads; t++) {
+ localAggs.add(new OpenHashTable());
+ threads[t] = new Thread(new Task(t), "Thread-" + t);
+ threads[t].start();
+ }
+
+ for (var thread : threads) {
+ thread.join();
+ }
+
+ var globalAggs = mergeAggregations(localAggs);
+
+ Map<String, ResultRow> res = new TreeMap<>();
+ for (Map.Entry<String, OpenHashTable.Entry> entry : globalAggs.entrySet()) {
+ final var ma = entry.getValue();
+ res.put(entry.getKey(), new ResultRow(ma.min / 10.0, (ma.sum / 10.0) / ma.count, ma.max / 10.0));
+ }
+ System.out.println(res);
+ }
+}